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Aug. 14, 2018
Created
Mar. 28, 2018

Matchbox

Matchbox enables deep learning researchers to write PyTorch code at the level of individual examples, then run it efficiently on minibatches. It does this using three components:

  • A MaskedBatch type, together with overloaded implementations of PyTorch methods and neural network layers, keeps track of padding and masking for variable-size data automatically. Use dir(matchbox.MaskedBatch) to see a list of supported methods.
  • A @batch decorator rewrites some Python control flow into a SIMT-like form that includes execution masking and synchronization primitives.
  • Convenience methods like batch_ones, split_dim, and causal_mask support common use cases in dynamic neural network code in a way that benefits from the more semantically meaningful shape information available with the MaskedBatch type. These are implemented both for batch and tensor objects, because all code written for Matchbox also works with plain Tensors at batch size one.

There is also a plugin for torchtext and a wrapper for testing that Matchbox results are numerically equivalent to a loop over unbatched examples. See the examples and test directories for details.

Installation and requirements

Matchbox is in early-release alpha. Use python setup.py install to install. Please file or upvote issues to request new operation implementations, or feel free to post one as a pull request. If Matchbox throws a NotImplementedError, that means that a particular feature of an operation could be supported but isn't yet.

Matchbox is developed on Python 3.6 and PyTorch 0.4. It contains compatibility code that is intended to support PyTorch 0.3, but not all features will work. Matchbox also requires gast, astor, and six. Python 2 support is not an immediate priority but we would welcome a PR.

Getting started

The first step to using Matchbox is to replace your import of torch.nn.functional with matchbox.functional:

import matchbox
import matchbox.functional as F
# now calls like `F.softmax` refer to Matchbox's implementations

This import also replaces methods on PyTorch Tensors with Matchbox versions and injects matchbox.functional functions into torch.nn modules.

Now you can write model code that applies to individual examples. If your code uses control flow, add the @matchbox.batch decorator to that function or class (unfortunately, this doesn't yet work in the interactive interpreter or in Jupyter notebooks):

from torch import nn
class RNN(nn.Module):
    def __init__(self, size):
        super().__init__()
        self.cell = nn.RNNCell(size, size)
    @matchbox.batch
    def forward(self, x):
        h = x.new_zeros(x.size(0), x.size(-1))
        for xt in x.unbind(1):
            h = self.cell(xt, h)
        return h

You can create input data to pass to this model in three ways. First, you can pass them ordinary PyTorch Tensors with batch size one. You can also pass MaskedBatch objects created manually, from lists of Tensors with batch size one (note that torch.rand should be wrapped in Variable on PyTorch 0.3):

import torch
from matchbox import MaskedBatch
from random import randint
b, t, c = 32, 10, 128
model = RNN(c)
x_unbatched = torch.rand(1, randint(1, t), c) # a single random example
x_manual_batch = MaskedBatch.fromlist(
    [torch.rand(1, randint(1, t), c) for i in range(b)], # list of examples
    (True, False)) # dimension 1 is dynamic and dimension 2 is static
h = model(x_unbatched)
h = model(x_manual_batch)

And we provide a torchtext Field class that produces MaskedBatch objects when a dataset is iterated:

from matchbox.data import MaskedBatchField
TEXT = MaskedBatchField(batch_first=True)
train, dev, test = datasets.IWSLT.splits(('.de', '.en'), (TEXT, TEXT))
TEXT.build_vocab(train, max_size=50000)
train_iter = data.BucketIterator(train, batch_size=32, device=-1)
for x_torchtext_batch in train_iter:
    h = model(x_torchtext_batch)
    # more training loop code

Credit

Matchbox is developed by James Bradbury at Salesforce Research. It also contains Python source-wrangling code modified from Patrick Maupin and Berker Peksag's AST observe-rewrite as well as Google Brain's Tangent, a source-to-source automatic differentiation package developed by Alex Wiltschko, Bart van Merrienboer and Dan Moldovan. The modified Tangent code is licensed under Apache 2 while the rest of the codebase is licensed under three-clause BSD; see LICENSE.BSD-3.txt and LICENSE.Apache-2.txt.

Limitations

Matchbox only works on code that uses native PyTorch operators. In particular, everything that could vary between examples in a batch needs to be a Tensor in order for code written for individual examples to work with Matchbox. Support for scalar tensors is significantly better in PyTorch 0.4. NumPy ops also need to be replaced with their native PyTorch equivalents.

Control flow support is limited. While some of these limitations will be lifted (e.g., support for continue within while is straightforward to add) some constructs are conceptually harder for Matchbox to support (e.g., return from within a for).

There’s also a long tail of less-common operations that haven’t been implemented (plus bigger gaps, like convolutions). We will be continuously adding support for additional ops but also welcome pull requests.

Implementation details (batch semantics)

MaskedBatch objects behave like PyTorch Tensors, but represent a collection ("batch") of Tensors that may be of different sizes in some of their dimensions. Most of the time, MaskedBatch objects adhere to Matchbox's "standard" semantics, but control flow constructions require a different "SIMT" semantics.

Standard

The dims attribute is a tuple with a bool for each non-batch dimension, representing whether that dimension is static (False) or dynamic (True).

The data attribute is a Tensor whose size is the batch size in the batch dimension, the size of all examples in static dimensions, and at least as large as the largest example in the batch in dynamic dimensions.

The mask attribute is a Tensor whose size is the batch size in the batch dimension, one in static dimensions, and at least as large as the largest example in the batch in dynamic dimensions. Each entry in the mask corresponds to one or more entries in the data array (singleton, i.e., static, dimensions are broadcasted), with a one in the mask denoting that the corresponding data entries represent valid, meaningful data and a zero denoting that they do not.

Data values corresponding to zeros in the mask are not required to be zero, and operations should propagate masked data if doing so would not affect non-masked parts of the output. Operations for which this is not the case should first multiply their input data by the corresponding masks.

SIMT

A one in the mask denotes that the corresponding data entries represent currently active data. A zero denotes that the corresponding data entries represent "dormant" data, which may be valid at a previous step of a loop (e.g., at a previous index along an external dimension that is being iterated over) or in another branch of a conditional. Currently, no dimensions in a SIMT batch may be dynamic, but support for this case will be added.

Future work

In addition to adding MaskedBatch support for more operations, we also plan a separate PackedBatch type that can pack its data tensor along its batch dimension and one dynamic dimension and store a separate tensor of offsets. This type will be natively compatible with cuDNN RNNs and saves memory relative to MaskedBatch, but will be slower for some operations.